epinowcast
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Functions | |
int | check_for_analytical (int dist_id, int primary_dist_id) |
real | primary_censored_gamma_uniform_lcdf (data real d, real q, array[] real params, data real pwindow) |
real | primary_censored_lognormal_uniform_lcdf (data real d, real q, array[] real params, data real pwindow) |
real | primary_censored_dist_analytical_lcdf (data real d, int dist_id, array[] real params, data real pwindow, data real D, int primary_dist_id, array[] real primary_params) |
real | primary_censored_dist_analytical_cdf (data real d, int dist_id, array[] real params, data real pwindow, data real D, int primary_dist_id, array[] real primary_params) |
int check_for_analytical | ( | int | dist_id, |
int | primary_dist_id | ||
) |
Check if an analytical solution exists for the given distribution combination
dist_id | Distribution identifier for the delay distribution |
primary_dist_id | Distribution identifier for the primary distribution |
Definition at line 10 of file primary_censored_dist_analytical_cdf.stan.
real primary_censored_dist_analytical_cdf | ( | data real | d, |
int | dist_id, | ||
array[]real | params, | ||
data real | pwindow, | ||
data real | D, | ||
int | primary_dist_id, | ||
array[]real | primary_params | ||
) |
Compute the primary event censored CDF analytically for a single delay
d | Delay |
dist_id | Distribution identifier |
params | Array of distribution parameters |
pwindow | Primary event window |
D | Maximum delay (truncation point) |
primary_dist_id | Primary distribution identifier |
primary_params | Primary distribution parameters |
Definition at line 189 of file primary_censored_dist_analytical_cdf.stan.
real primary_censored_dist_analytical_lcdf | ( | data real | d, |
int | dist_id, | ||
array[]real | params, | ||
data real | pwindow, | ||
data real | D, | ||
int | primary_dist_id, | ||
array[]real | primary_params | ||
) |
Compute the primary event censored log CDF analytically for a single delay
d | Delay |
dist_id | Distribution identifier |
params | Array of distribution parameters |
pwindow | Primary event window |
D | Maximum delay (truncation point) |
primary_dist_id | Primary distribution identifier |
primary_params | Primary distribution parameters |
Definition at line 141 of file primary_censored_dist_analytical_cdf.stan.
real primary_censored_gamma_uniform_lcdf | ( | data real | d, |
real | q, | ||
array[]real | params, | ||
data real | pwindow | ||
) |
Compute the primary event censored log CDF analytically for Gamma delay with Uniform primary
d | Delay time |
q | Lower bound of integration (max(d - pwindow, 0)) |
params | Array of Gamma distribution parameters [shape, rate] |
pwindow | Primary event window |
Definition at line 27 of file primary_censored_dist_analytical_cdf.stan.
real primary_censored_lognormal_uniform_lcdf | ( | data real | d, |
real | q, | ||
array[]real | params, | ||
data real | pwindow | ||
) |
Compute the primary event censored log CDF analytically for Lognormal delay with Uniform primary
d | Delay time |
q | Lower bound of integration (max(d - pwindow, 0)) |
params | Array of Lognormal distribution parameters [mu, sigma] |
pwindow | Primary event window |
Definition at line 82 of file primary_censored_dist_analytical_cdf.stan.